Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHVLIAVILFFLSIGLSAGCAEAGNKTQNQSATEVNASPLQPAEYFIYHNLMNDKGLIKTDFSDQPSYLSESLGLWMEFLLSKNDAPHFQDQYQHLTDSFLM-S--NHLVTWKIQNG------QASGTNALIDDMRIMLSLDQAAAKWGRSDYAQTARDIGTSLKTYNMNN----GFFT--DFYDSQ-AASKDVTLSYVMPDALAVLKKNGIIDEETEQRNANVLYSAPLKNGFLPKTYSSETK-EYTY---DSEINLIDQLYAAWHLPEGDEKAS---VLADWIK---QEFQKNGKLYGRYSAYTKEPAVQYESPSVYALAVLFLTKQHENSSVIKAIYDRMNDFEIHDPVKSYYGGYMSGTQTHSFDNLLPLLAERKLFNENIIQ
3QXF Chain:A ((24-344))---------------------------------------TWPAWEQFKKDYISQEGRVIDPSDAR-KITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETA-PKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQG-KGPVGFSAAMLPFLQ-N-RD----AQAVQRQRVADNF------------PGSDAYYNYVLTLFGQGWD-------


General information:
TITO was launched using:
RESULT:

Template: 3QXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1590 -86945 -54.68 -294.73
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -54.68
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.423

(partial model without unconserved sides chains):
PDB file : Tito_3QXF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QXF-query.scw
PDB file : Tito_Scwrl_3QXF.pdb: