Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWMTVCALCFVFFLLVSCQQKDAVPDTAKKLKAPLTGLKTEQKVTERRPVAVVVNNHPKARPQSGLSKADIVIEALAEGQITRFLAIFQSQMPETVGPVRSAREYFVTLSNGFDSIFVHHGWSPGAKKQLESGAADYMNG-LDFDGSLFWRADFSKPPHNSYTSYDYIKKAAEQKGYKLKQETNPLLFQTSDAKPANESYNVRVDYGTNNVTNLVEYNYDKKAEFYTRSSDGVITTDRETGKPVAMQNIFIVEASHHIIDQDGRRDIDLESGGKGLLFQHGNVIETDWKQVNGRIVPVKDGKWLPFVPGKTWINIVPDLDAASISKGEGV
2OHE Chain:A ((47-120))------------------------------------------------------------------------------------------------------------------------------------------YFKGRISFQNSDSFRDLFDTVTFDRYVAYEILK----NKGYRVKEDSGLIYFRKGTEKPL--SLRVMREYDRIQFSDLVE------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2OHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 164 -13623 -83.07 -186.62
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -83.07
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_2OHE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OHE-query.scw
PDB file : Tito_Scwrl_2OHE.pdb: