Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKRITFGLLVLMVCVILFVLYVQLRNKDSIPVQSSAIHPEEDRIFFIYSNPFIKESVLLSTSTGERFNRRTFKVADVPYIQTKSYASTDLVLLAEHEPFYYTLEKDVIKEHPLSDPFAFWYEGKDVTIEAYNVDTTGNEIHINDRKTKKEYTLTLPPLVTMGASDENFIYIIQSMSIYVIDRKTEEMIETLSLASYADQFADSEEFIVASSDHKLTVIEKGTWKTTYIAYPEDLEYADTVYYDKESGSFYVAYEDKEGGANLLEYGEDFSIHTYSLKFPYMEAKFKGNLLYIVAQEEHKKGIGGYVGVFDIHSKEMLYQFDLPEEQVKVQDFVVVDNK
5DH0 Chain:B ((218-258))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRFEERVEEISTA-YADQLADTTFALVFGVDGEFAVVNTNAW-------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5DH0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 35 -10332 -295.20 -252.00
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain B : 0.51

3D Compatibility (PKB) : -295.20
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_5DH0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DH0-query.scw
PDB file : Tito_Scwrl_5DH0.pdb: