Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLR----------SIG---PE----P-WKVAYVEPSRRP-ADG-RYGENPNRLYQHH---------------------QFQVIIKPSPDNIQELY---L------------DS---LRALGIDPLEHDIRFV-EDNWENP-SLGCAGLGWEVWLD-----------------GMEITQFTYFQ--Q-V-GG-LECKPVSVEITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE
4XEM Chain:A ((25-280))LTASEIRQRFIDFFKRNEHTYVHSSATIPLD---DPTLLFANAGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAG-DLDDVGKD---VYHHTFFEMLGSWSFGDYFKELACKMALELLTQEFGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGL-DDTKILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDT----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4XEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 578 -2138 -3.70 -12.65
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -3.70
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_4XEM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XEM-query.scw
PDB file : Tito_Scwrl_4XEM.pdb: