Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELIIILLALGLLMFTAYRGFSVILFAPICALFAVLLTDPSHVLPFFSSIFMEKMAGFIKLYFPVFLLGAIFGKVVEMAGLAASIAKTIVRLVGAK--RAILAIVLMGAVLTYSGVSLFVVVFAVYPFAKNMFQEANIPKRL-----IPGTIALGAFTFTMDALPGTPQIQNVIPTSFFKTDIYAAPWLGLMGAVIVLAAGMLYLESRRKKAQASGEGYGGFDSQNAPAPESIESAAEPDKSPIRHALAFVPLILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEIALVIGIITTILFDWRSVFAQLKEGLNEGIGGALLASMNTGAEYGFGGIIAALPGFHKLSSGISHT-FT-DPLVNG---AVTTTALAGITGSASGGMGIALSAMSEQYLQAIQAYNIPPEVMHRVISMASGGMDTLP-HNGAVITLLAVTGLTHRQSYRDIFAITLIKTAA-VFAVIAIYSLTGLV
4F35 Chain:D ((48-449))-----------------TEALHVTVTAILVPVMAVFFG-I---FETQA-----ALNNFANSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSM-WISNTATAAMMLPLVLGVLSKVDADKQRSTYVFVLLGVAYSASIGGIATLVGSPP--NAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLL-------------------------VNWDK-----GKVVTLGIFGLTVFLWI-----FSSPI-NAAL---------GGF----KSF--DTLVA-LGAILMLSFARVVH-----WKEIQKTAD--WGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHMGIFVVILVVATFVVFLT-EFASNTAS----AALLIPVFATVAEAFGMSPVLLSVLIAVAASCAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAMLFWQ-----


General information:
TITO was launched using:
RESULT:

Template: 4F35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1979 -228119 -115.27 -609.94
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain D : 0.64

3D Compatibility (PKB) : -115.27
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.279

(partial model without unconserved sides chains):
PDB file : Tito_4F35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F35-query.scw
PDB file : Tito_Scwrl_4F35.pdb: