Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDILREIGMIARALDSISNIEFKDLDLTRGQYLYLVRIYENPGIIQEKLAEMIKVDRTTAARAIKKLEMQGFIQKLPDEQNKKIKKLFPTEKGKKVYPLLRREGEHSTEVALSG---FTSEEKETISALLHRVRKNIERDWEYVKKGNKRDY
3BDD Chain:A ((17-133))---------------ETISNLFEKQLGISLTRYSILQTLLKDAPLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREA--LITNPSAHHQAIKTSMNQILTVEESEQFLATLDKL-------------------


General information:
TITO was launched using:
RESULT:

Template: 3BDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 338 -44499 -131.65 -390.34
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -131.65
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_3BDD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BDD-query.scw
PDB file : Tito_Scwrl_3BDD.pdb: