Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSDTSPNGLSRREELLAVATKLFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLI---LFDIYRQAAEGTLAAVHDDPSWTAREALYQYTVRLL-TAIASNPERAAVYFQEQPYITEWFTSEQVAEVREKEQQVYEHVHGLIDRGIASGEFYECDSHVVALGYIGMTLGSYRWLRPSGRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGTRKET
3RD3 Chain:A ((9-168))
------------RQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRIT-LRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGA---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RD3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66003 for 1027 contacts (-64.3/contact) +
2D Compatibility (PS) -16768 + (NN) -7439 + (LL) 3004
1D Compatibility (HY) -12000 + (ID) 1750
Total energy: -100956.0 ( -98.30 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_3RD3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RD3-query.scw
PDB file :
Tito_Scwrl_3RD3.pdb
: