Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNEVHPDLRRIAVVTPRQLVGPRTLPVMRALIVVAGLRMSRTPPDIEVLTLESGVGVRLYRPAGSNEPAPALLWIHAGGYVMGTAQQDDRLCLRFSSRLGITVASVDYRLAPENPYPAALGDCYSALTWLASLPA---VDPARVAIGGASAGGGLAAALALLARDRGGITPAFQLLVYPMLDDRPSIAPANPHYRLWNG-----RANRFGWRAYLGD----ADARVA-VPGRRDDLGGLAPAWIGVGTHDLLHDEDLAYAERLTAAGVPCQVEVVEGAFHGFDRVAPNVGVSQRFFTSQCNSLRAALALSNRT |
| 4V2I Chain:A ((65-287)) | ----------------------------------------------------------VRIIRPQGNTDRLPVIVYFHGAGWVMGDTGTHDRLVRELSVRANAALVFVDYERSPEARYPVAIEQDYAVTKYVAEHSEQLNVDPTRLAIAGDSVGGNMTAVVSLLAQERGGPDITAQVLFYPVTD---ADFDNGSYTEFANGPWLTKPAMDWFWNQYLPEGIDRTDPKITPIHATSEQLSGQAPALVITAENDVLRDEGEAYARKLSQAGVDVTVTRYNGTIHDF------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141744 for 1765 contacts (-80.3/contact) +
2D Compatibility (PS) -23194 + (NN) -20198 + (LL) 5884
1D Compatibility (HY) -14400 + (ID) 3750
Total energy: -197402.0 ( -111.84 by residue)
QMean score : 0.550
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