Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG--------ATIAPNGDV-SPPIRGVRLDGTGGTLRIVDRDGGGLDGD---AAVERAMGPMQFISETWRLYGVAARNDGIANVD-NIDDAALSAAGYLCWRGKDLAT------------------------------------------------------PRGW-----ITALRAYNNSVIYARAVRDWATAYAAGHPL |
| 4ANR Chain:A ((87-319)) | ----------------------------------------------------------------------------VDFWNKHAEDLARAEKEYGVPAEIIVSIIGVETFFGRNTGSYRVMDALSTLGFDYPPRADFFRKE-LR---EF--LLLAREQQVDPLSLTGSYAGAMGLPQFMPSSFRAYAVDFDGDGHINIWSDPTDAIGSVASYFKQHGWVTGEPVVSVAEINDESAESAVTRGVDPTMSLGELRARGWRTLRDDQKVTAMRFVGDKGIEYWVGLPNFYVITRYNRSAMYAMAVYQLAGEIARA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ANR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43795 for 1181 contacts (-37.1/contact) +
2D Compatibility (PS) -16614 + (NN) -3367 + (LL) 4680
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -67346.0 ( -57.02 by residue)
QMean score : 0.224
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