Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAAVT--NTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK |
1UCU Chain:A ((396-474)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAEAAATTTENPLQKIDAALAQVDT----LRSDLGAVQNRFNSAITNLGNTVNNLTSVRSRIEDSDYATEVSNMSRAQILQQA----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5612 for 302 contacts (-18.6/contact) +
2D Compatibility (PS) -8047 + (NN) -2075 + (LL) 17400
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -2034.0 ( -6.74 by residue)
QMean score : 0.122
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