Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMVKSIAAGLTAAAAIGAAAAGVTSIMAGGPVVYQMQPVVFGAPLPLDPASAPDVPTAAQLTSLLNSLADPNVSFANKGSLVEGGIGGTEARIADHKLKKAAEHGDLPLSFSVTNIQPAAAGSATADVSV--SGPKLSSPVTQN--VTFVNQ-GGWMLSRASAMELLQAAGN
3B7C Chain:A ((68-118))
-------------------------------------------------------------------------------------------------------------LKFTIKEIKMLSNYAAMVVGRWDLKRLKD--TPTGVFTLLVEKIDDRWVITMD-----------
General information:
TITO was launched using:
RESULT:
Template:
3B7C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16144 for 200 contacts (-80.7/contact) +
2D Compatibility (PS) -5066 + (NN) -949 + (LL) 7108
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -17801.0 ( -89.01 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_3B7C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B7C-query.scw
PDB file :
Tito_Scwrl_3B7C.pdb
: