Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEWSDTDLMVRDAVRQFIDKEIRPHQDALETGELSPYPIARKLFSQFGLDVLLAESVNQMLDGERAKREKRDSSGSFGLADQASMVAVLVSELAGVSIGLLSTVAVSLGLGAATIMSRGTLAQQERWVPTLVTLEKIAAWAITEPDSGSDAFGGMKTHVTRDGEDYILNGHKTFITNGPYADVLVVYAKLADGEPASDWRNRPVLVFVLDAGMPGLTQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLCAEGDGRDSARANFAVERLGVALMSLGIINECHRLCVDYAKTRTLWGRNIGQFQLIQLKLAKMEVARINVQNMVFQAIERLKAGKQLTLAEASAIKLYSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNEVQVTHIAKGLLGEPASRA |
| 2VIG Chain:A ((6-379)) | ---LPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKM----GGLGLLAMDVPEELGGA-------------GLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLG--PILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDA-GAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRA-----LQNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRA-AMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177743 for 3434 contacts (-51.8/contact) +
2D Compatibility (PS) -40876 + (NN) -21218 + (LL) 2056
1D Compatibility (HY) -16400 + (ID) 6400
Total energy: -260581.0 ( -75.88 by residue)
QMean score : 0.467
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