Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLQAREGAPLNRYYDPYFACDAVKLLPGEYFASGEDLVIVTVLGSCVSVCLRDPLNGIAGMNHFMLPERGLGGDPASPSARYGSHAMELLINRMLALGASRERLQAKVFGGGSVLRQISAAIGQRNVEFTLDYLATERIPLLASDVLEAFPRKIYFFPRNGRVLVKSLVELKNDTVLQRERDYRRRIDRNADGGPIDLF |
4EO8 Chain:A ((292-363)) | --LTTSCGNTLTCYLKASAACRAAKLQDCTMLVNGDDLVVI-----CESAGVQEDAASLRAFTEAMTRYSAPPGDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETARHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGACYSIEPLDLPQIIERLHGLSAFSLHSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25334 for 436 contacts (-58.1/contact) +
2D Compatibility (PS) -7672 + (NN) -606 + (LL) 348
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -36664.0 ( -84.09 by residue)
QMean score : 0.105
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