Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE
2XI8 Chain:A ((6-66))
----LKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XI8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23877 for 379 contacts (-63.0/contact) +
2D Compatibility (PS) -6816 + (NN) -5246 + (LL) 7896
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -32943.0 ( -86.92 by residue)
QMean score : 0.865
(partial model without unconserved sides chains):
PDB file :
Tito_2XI8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XI8-query.scw
PDB file :
Tito_Scwrl_2XI8.pdb
: