Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPDKFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLLYYREKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAETLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDG-GTGSRTSTPTLNMEFTF |
2K0L Chain:A ((155-192)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDIATRLEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1932 for 130 contacts (-14.9/contact) +
2D Compatibility (PS) -3954 + (NN) -1550 + (LL) 12384
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 2648.0 ( 20.37 by residue)
QMean score : 0.273
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