Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTISKTKSSFYRRLYVAYLIDS-GTASVPEIMAAT-----GMPRRTAQDTIAALEELDIVCEFEQREGARNHQGGYVIRDWGAVRREWVVEQHRRIAAALEYPAD
1MZB Chain:A ((17-71))
--------TLPRVKILQMLDSAQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKE
General information:
TITO was launched using:
RESULT:
Template:
1MZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30785 for 294 contacts (-104.7/contact) +
2D Compatibility (PS) -5307 + (NN) -575 + (LL) 588
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -39629.0 ( -134.79 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1MZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZB-query.scw
PDB file :
Tito_Scwrl_1MZB.pdb
: