Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQQPDPCNAYHTDEQRWAAVLARDAAADGAFVYAVKTTGVYCRPSSSARRPRRENVEFFATAEAAEAAGYRPSRRAAGDRSLAAEQRAERVAQACRMIETAETPPALEALAARLGMSPFHFHRLFKAETGLTPKAYASAYRARRLRERLGQASASVTEAIYDSGFNSNSRFYESSSQRLGMRPRDYRDGGAGAAIRFAIGQCSLGAILVAQSQRGICAILLGEEPEPLLRELQDQFPRAQLLGGDADFERLVAQVVGFVESPQLGLDLPLD-VRGTAFQER------VWQALREIPPGSTASYAQVAERIGAPRAVRAVAQACAANRIAVAIPCHRVVRRDGDISGYRWGVERKRELLRREERD |
| 1QNT Chain:A ((50-172)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAVLGGPEPLMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39996 for 749 contacts (-53.4/contact) +
2D Compatibility (PS) -12448 + (NN) -7039 + (LL) 16588
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -53995.0 ( -72.09 by residue)
QMean score : 0.484
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