Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSDVIKGKWKQLTGKIKERWGDLTDDDLQAADGHAEYLVGKLQERYGWSKERAEQEVRDFSDRL
2KMF Chain:A ((37-53))
------------------------------------------------EVQDTARGQINDYISRY
General information:
TITO was launched using:
RESULT:
Template:
2KMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1114 for 64 contacts (17.4/contact) +
2D Compatibility (PS) -1864 + (NN) -256 + (LL) 2616
1D Compatibility (HY) -800 + (ID) 150
Total energy: 660.0 ( 10.31 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_2KMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KMF-query.scw
PDB file :
Tito_Scwrl_2KMF.pdb
: