Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
2G78 Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGELILTMTADDVVCTKVFVRE
General information:
TITO was launched using:
RESULT:
Template:
2G78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38809 for 1005 contacts (-38.6/contact) +
2D Compatibility (PS) -15296 + (NN) -4981 + (LL) 208
1D Compatibility (HY) -18400 + (ID) 6300
Total energy: -83578.0 ( -83.16 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_2G78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G78-query.scw
PDB file :
Tito_Scwrl_2G78.pdb
: