Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
4L9W Chain:A ((6-171))
MTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4L9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98614 for 1371 contacts (-71.9/contact) +
2D Compatibility (PS) -18413 + (NN) -7915 + (LL) 928
1D Compatibility (HY) -22400 + (ID) 7550
Total energy: -153964.0 ( -112.30 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_4L9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L9W-query.scw
PDB file :
Tito_Scwrl_4L9W.pdb
: