Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITR---NESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIY----KDIHCDVF--FPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
1IA3 Chain:A ((9-191))
--------IVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNT---RNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYENEIID-DNIIH-ASSIESSLNLVS---------DVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLKFPLE--------SWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTR--
General information:
TITO was launched using:
RESULT:
Template:
1IA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121024 for 1223 contacts (-99.0/contact) +
2D Compatibility (PS) -18650 + (NN) -2138 + (LL) 1796
1D Compatibility (HY) -18000 + (ID) 3700
Total energy: -161716.0 ( -132.23 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1IA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IA3-query.scw
PDB file :
Tito_Scwrl_1IA3.pdb
: