Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQTWTVQNNGHSVMMLL---ENKASISGGGLPAPYQAKQLHLHWSDLPYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLD---LLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYY-DKEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 3ML5 Chain:A ((8-266)) | ------------------GHHGWGYGQDDGPSHWHKLYPI-----AQGDRQSPINIISSQAVYSPSLQPLELS-YEACMSLSITNNGHSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELHLVHWNAKKYS-TFGEAASAPDGLAVVGVFLETGDE-HPSMNRLTDALYMV---RFKGTKAQFSCFNPKSLLPAS---RHYWTYPGSLTTPPLSESVTWIVLREPISISERQMGKFRSLLFTSEDDERIHMVNNFRPPQPLKGRVVKAS---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ML5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90425 for 2026 contacts (-44.6/contact) +
2D Compatibility (PS) -26456 + (NN) -5084 + (LL) 3528
1D Compatibility (HY) -19200 + (ID) 4650
Total energy: -142287.0 ( -70.23 by residue)
QMean score : 0.319
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