Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
3L5V Chain:A ((1-114))
-PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA
General information:
TITO was launched using:
RESULT:
Template:
3L5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89523 for 798 contacts (-112.2/contact) +
2D Compatibility (PS) -13075 + (NN) -11488 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 5700
Total energy: -135978.0 ( -170.40 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_3L5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L5V-query.scw
PDB file :
Tito_Scwrl_3L5V.pdb
: