Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA
1BSJ Chain:A ((1-166))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA--
General information:
TITO was launched using:
RESULT:
Template:
1BSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83553 for 1273 contacts (-65.6/contact) +
2D Compatibility (PS) -17483 + (NN) -125 + (LL) 452
1D Compatibility (HY) -24000 + (ID) 8300
Total energy: -133009.0 ( -104.48 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_1BSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BSJ-query.scw
PDB file :
Tito_Scwrl_1BSJ.pdb
: