Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAAGRLFLSRLRAPFSSMAKSPLEGVSSSRGLHAGRGPRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGTQKACTAQSLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREVNTFVKNL
3KFX Chain:A ((38-279))
-----------------------------------TRIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQST---------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKD---KYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
3KFX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125159 for 1785 contacts (-70.1/contact) +
2D Compatibility (PS) -23980 + (NN) -3356 + (LL) 2848
1D Compatibility (HY) -26000 + (ID) 6050
Total energy: -181697.0 ( -101.79 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_3KFX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KFX-query.scw
PDB file :
Tito_Scwrl_3KFX.pdb
: