Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAASGEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYLPQKTASSSHPSA
4KXN Chain:C ((4-144))
----------SVYFCGSIRGGREDQALYARIVSRLRRYGKVLT-----------------GDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYL------------
General information:
TITO was launched using:
RESULT:
Template:
4KXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96686 for 920 contacts (-105.1/contact) +
2D Compatibility (PS) -13674 + (NN) -7943 + (LL) 1880
1D Compatibility (HY) -19200 + (ID) 6150
Total energy: -141773.0 ( -154.10 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_4KXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KXN-query.scw
PDB file :
Tito_Scwrl_4KXN.pdb
: