Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRP-------LFRWQLCPGWPVLAQLAVGSALFSIVVPVLAPGLGSTRSSA-LCSLGYCVWYGSAFAQALLLGCHASL--GHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGASGGLCTLIYSTELKAL-QATHTVACLAIFVLLPLGLFGAKGLKKALGMGP----GPWMNILWAWFIFWW----PHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
| 3MKT Chain:A ((211-411)) | -------------------------------------------------------------LLFYIVTS--KRLAHVKVFETFHKPQPKELIRLFRL----GFPVAAALFFEVTLFAVVALLVAP-LGSTVVAAHQVALNFS---SLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVG---------LMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQKQSDDVQLHLAAK------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103212 for 1197 contacts (-86.2/contact) +
2D Compatibility (PS) -18433 + (NN) -4686 + (LL) 6284
1D Compatibility (HY) -15600 + (ID) 2900
Total energy: -138547.0 ( -115.75 by residue)
QMean score : 0.061
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