Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTI--------VFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHG-WVLGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVTKVPSQSGV-GKPCWIICFCVWMAAILLSIPQLVFYTV---NDNARC---IPIFPRYLGTSMKALIQMLEICI---GFVVPFLIMGVCYFITARTLMKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTE---SIALFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI |
| 4EA3 Chain:A ((121-401)) | --------------------------------------------PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGP-------VFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVV--VAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215687 for 1835 contacts (-117.5/contact) +
2D Compatibility (PS) -25454 + (NN) -2710 + (LL) 6240
1D Compatibility (HY) -22000 + (ID) 3800
Total energy: -263411.0 ( -143.55 by residue)
QMean score : 0.256
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