Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIA----YSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLV--QAQNSKRHKAIRVIIAVVLVFLACQIP-HNMVLLVTAANLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQTSETADNDNASSFTM |
| 4RWA Chain:A ((114-406)) | -----------------------------------------RSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKA--LDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPS--WYWDTVTKICVFLFAFVVPILIITVCYGLMLL---GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249101 for 2079 contacts (-119.8/contact) +
2D Compatibility (PS) -28085 + (NN) -5818 + (LL) 5472
1D Compatibility (HY) -28000 + (ID) 4150
Total energy: -309682.0 ( -148.96 by residue)
QMean score : 0.283
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