Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPF---------WAHAGGDPMCKILIGLYFVGLYSETFFNCLLTVQRYLVFLH--KGNFFSARRRVPCGIITSVLAWVTAILATLPEFVVYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLRFREQRY------------SLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV |
| 5C1M Chain:A ((15-296)) | -----------------------------------VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPF--GNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK---IVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLT----FSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLM--ILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIK------ALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFK----RCF----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234362 for 1913 contacts (-122.5/contact) +
2D Compatibility (PS) -26108 + (NN) -7440 + (LL) 4624
1D Compatibility (HY) -37200 + (ID) 3850
Total energy: -304336.0 ( -159.09 by residue)
QMean score : 0.289
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