Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAAAFADSNSSSMNVSFAHLHFAGGYLPSDSQDWRTIIPALLVAVCLVGFVGNLCVIGILLHNAWKGKPSMIHSLILNLSLADLSLLLFSAPIRATAYSKSVWDLGWFVCKSSDWFIHTCMAAKSLTIVVVAKVCFMYASDPAKQVSIHNYTIWSVLVA-IWTVASLLPLPEWFFSTIRHHEGVEMCLVDVPAVAEEFMSM-FGKLYPLLAFGLPLFFASFYFWRAYDQCKK-RGTKTQNLRNQIRSKQVTVMLLSIAI-ISALLWLPEWVAWLWVWHLKAAGPAPPQGFIALSQVLMFSISSANPLIFLVMSEEFREGLKGVWKWMITKKPPTVSESQETPAGNSEGLPDKVPSPESPASIPEKEKPSSPSSGKGKTEKAEIPILPDVEQFWHERDTVPSVQDNDPIPWEHEDQETGEGVK |
2Y00 Chain:A ((7-296)) | -------------------------------SQQWEAGMSLLMALVVLLIVAGNVLVIAAI--GSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-------SRVMLMREHKALKTLGIIMGVFTLCWLPFFL--VNIVNVFNRDLVPDWLFVAFNW-LGYANSAMNPIIY-CRSPDFRKAFKRLLA------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -219103 for 2031 contacts (-107.9/contact) +
2D Compatibility (PS) -28349 + (NN) -11113 + (LL) 5408
1D Compatibility (HY) -24000 + (ID) 3050
Total energy: -280207.0 ( -137.97 by residue)
QMean score : 0.277
|
|
|