Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFAHRMDNSKPHLIIPTLLVPLQNRSCTETATPLPSQYLMELSEEHSWMSNQTDLHYVLKPGEVATASIFFGILWLFSIFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLISVASTPFVLLQFTTGRWTLGSATCKVVRYFQYLTPGVQIYVLLSICIDRFYTIVYPLSFKVSR--EKAKKMIAASWVFDAGFVTPVLFFYG--------SNWDSHCNYFLPSSWEGTAYTVIHFLVGFVIPSVLIILFYQKVIKYIWRIGTDGRTVRRTMNIVPRTKVKTIKMFLILNLLFLLSWLPFHVAQLWHPHEQDYKKSSLVFTAITWISFSSSASKPTLYSIYNANFRRGMKETFCMSSMKCYRSNAYTITTSSRMAKKNYVGISEIPSMAKTITKDSIYDSFDREAKEKKLAWPINSNPPNTFV |
| 4MQT Chain:A ((36-330)) | ------------------------------------------------------------KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFF-----SNAAVTFGTAIAAFYLPVIIMTVLYWHISRASK----------------PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNT-VWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMC-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189388 for 1949 contacts (-97.2/contact) +
2D Compatibility (PS) -26246 + (NN) -3408 + (LL) 9720
1D Compatibility (HY) -27200 + (ID) 3800
Total energy: -240322.0 ( -123.31 by residue)
QMean score : 0.271
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