Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVRNETTTYMINLAMSDLLFVFTLPFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSILFLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVW--LTVIGGSAPAVFVQSTHSQGNNASEACFENFPEATWKTYLSRI-VIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKI---NKTKVLKMIFVHLIIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAVS--NCCFDPIVYYFTSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDNESAA |
| 4EA3 Chain:A ((123-398)) | -------------GLKVTIVG-LYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVG--VPVAIMGS--AQVEDEEIECLVEIP--TPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGL-----GVQPSSETAVAIL---RFCTALGYVNSCLNPILYAFLDENFKACFR----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243224 for 1917 contacts (-126.9/contact) +
2D Compatibility (PS) -25930 + (NN) 134 + (LL) 5092
1D Compatibility (HY) -26800 + (ID) 4150
Total energy: -294878.0 ( -153.82 by residue)
QMean score : 0.225
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