Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDPTVPVFGTKLTPINGREETPCYNQTLSFTVLTCIISLVGLTGNAVVLW-LLGYRMRRNAVSIYILNLAAADFLFLS---FQIIRLPLRLINISHLIRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLS-------LLFSMLEWR----FCDFLFSGADSSWCETSDFIPVAWLIFLCVVLCVS-------SLVLLVRILCGSRKMP--LTRLYVTILLTVLVFLLCGLPFGILGALIYRMHLNL-EVLYCHVYLVCMSLSSLNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
4N6H Chain:A ((125-407)) | --------------------------AIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYW-DTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219989 for 1883 contacts (-116.8/contact) +
2D Compatibility (PS) -25941 + (NN) -3062 + (LL) 2916
1D Compatibility (HY) -22400 + (ID) 3500
Total energy: -271976.0 ( -144.44 by residue)
QMean score : 0.145
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