Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTCDIVTEANISSGPESNTTGI--TAFSMPS------WQLALWATAYLALVLVAVTGNAIVIWIILAHRRMRTVTNYFIVNLALADLCMAAFNAAFNFVYAS-HNIWYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRYMAIVHPFQP-RLSAPSTKAVIAGIWLVALALASPQCFYSTVTMDQGAT-KCVVAW---PEDSGGKTLLLYHLVVIALIYFLPLAVMFVAYSVIGLTLWRRAVPGHQAHGANLRHLQAMKKFVKTMVLVVLTFAICWLPY-HLYFILGSFQEDIYCHKFIQQVYLALFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRCCPWVTPTKEDKLELTPTTSLSTRVNRCHTKETLFMAGDTAPSEATSGEAGRPQDGSGLWFGYGLLAPTKTHVEI |
| 3PQR Chain:A ((12-326)) | ---------------PFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFM-VFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFII---PLIVIFFCYGQLVFTVKEAA--AQQQESATTQ--KAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMT---IPAFF-AKTSAVYNPVIYIMMNKQFRNCMVTTL-CC-GKN--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310000 for 2295 contacts (-135.1/contact) +
2D Compatibility (PS) -31578 + (NN) -16714 + (LL) 4940
1D Compatibility (HY) -34000 + (ID) 4350
Total energy: -391702.0 ( -170.68 by residue)
QMean score : 0.300
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