Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPLCLNCSVLPGDLYPGGARNPMACNGSAARGHFDPEDLNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYLFSLAVSDLLVLLVGLPLELYEMWHNYPFLLGVGGC----YFRTLLFEMVCLASVLNVTALSVERYVAVVHPLQARSMVTRAHVRRVLGAVWGLAMLCSLPNTSLHGIRQLHVPCRGPVPDSAVCMLVRPRALYNMVVQTTALLFFCLPMAIMSVLYLLIGLRLRRERLLLMQEAKGRGSAAARSRYTCRLQQHDRGRRQVTKMLFVLVVVFGICWAPFHADRVMWSVVSQWTDGLHLAFQHVHVISGIFFYLGSAA-NPVLYSLMSSRFRETFQEALCLGACCHRLRPRHSSHSLSRMTTGSTLCDVGSLGSWVHPLAGNDGPEAQQETDPS |
| 3DQB Chain:A ((37-326)) | -----------------------------------------------------------FSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGY-FVFGPTGCNLEGFFATLGGEI----ALWSLVVLAIERYVVVCKPM-SNFRFGENHAIMGVAFTWVMALACAAP--PLVGWSRY-------IPEGMQCSC--GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQ---------KAEKEVTRMVIIMVIAFLICWLP-YAGVAFYIFTHQGSD-----FGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGK--N------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255025 for 2258 contacts (-112.9/contact) +
2D Compatibility (PS) -29777 + (NN) -10548 + (LL) 5392
1D Compatibility (HY) -30000 + (ID) 4200
Total energy: -324158.0 ( -143.56 by residue)
QMean score : 0.290
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