Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSFFGTPAASWCLLESDVSSAPDKEAGRERRALSVQQRGGPAWSGSLEWSRQSAGDRRRLGLSRQTAKSSWSRSRDRTCCCRRAWWILVPAADRARRERFIMNEKWDTNSSENWHPIWNVNDTKHHLYSDINITYVNYYLHQPQVAAIFIISYFLIFFLCMMGNTVVCFIVMRNKHMHTVTNLFILNLAISDLLVGIFCMPITLLDNIIAGWPFGNTMCKISGLVQGISVAASVFTLVAIAVDRFQCVVYPFKPK--LTIKTAFVIIMIIWVLAITIMSPSAVMLHVQEEKYYRVRLNSQNKTSPVYWCREDWPNQEMRKIYTTVLFANIYLAPLSLIVIMYGR-----------IGISLFRAAVPHTGRKNQEQWHVVSR--KKQKIIKMLLIVALLFILSWLPLWTLMMLSDYADLSPNELQIINIYIYPFAHWLAFGNSSVNPIIYGFFNENFRRGFQEAFQLQLCQKRAKPMEAYALKAKSHVLINTSNQLVQESTFQNPHGETLLYRKSAEKPQQELVMEELKETTNSSEI |
| 3SN6 Chain:R ((191-490)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------LIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVS-GLTSFLPIQMH-----WYR---QEAINCYAEETCCDFFTNQAYAIASSIVSF----YVPLVIMVFVYSRVFQEAKRQLQKIDKSEGR-------------------CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD------NLIRKEVYILLNWIGYVNSGFNPLIY-CRSPDFRIAFQEL----LC------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253973 for 1901 contacts (-133.6/contact) +
2D Compatibility (PS) -26279 + (NN) -5800 + (LL) 18504
1D Compatibility (HY) -26000 + (ID) 4300
Total energy: -297848.0 ( -156.68 by residue)
QMean score : 0.200
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