Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNQTQMMEFLLVRFTENWVLLRLHALLFSLIYLTAVLMNLVIILLMILDHRLHMAMYFFLRHLSFLDLCLISATVPKSILNSVASTDSISFLGCVLQLFLVVLLAGSEIGILTAMSYDRYAAICCPLHCEAVMSRGLCVQLMALSWLNRGALGLLYTAGTFSLNFYGSDELHQFFC-DVPALLKLTCSKEHAIISVSVAIGVCYAFSCLVCIVVSYVYIFSAVLRISQRQRQSKAFSNCV----PHLIVVTVFLVTG--AVAYLKPGSDAPSILDLLVSVFYSVAPP---------------TLNPVIYCLKNKDIKSALSKVLWNVRSSGVMKR |
| 2Y03 Chain:A ((15-299)) | -------------------------SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVW----AISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIIS----FYIPLLIMIFVALRVYREAKEQIR----------SRVMLMREHKALKTLGIIMGVFTLCWL------PFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -249613 for 1802 contacts (-138.5/contact) +
2D Compatibility (PS) -25873 + (NN) -9489 + (LL) 4716
1D Compatibility (HY) -20400 + (ID) 3200
Total energy: -303859.0 ( -168.62 by residue)
QMean score : 0.266
|
|
|