Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYFLAMLAATDLGVTLTTMPTVLGVLWLDHREIGHGACFSQAYFIHTLSVMESGVLLAMAYDCFITIRSPLRYTSILTNTQVMK-IGVRVLTRAGLSIMPIVVRLHWF-----PYCRSHVL----SHAFCLHQDVIKLACADITFNRLYPVVVLFAMVLLDFLIIFFSYILILKTVMGIGSGGERAKALNTCVSHIC------------CILVFYVTVVCLTFIHRFGKHVP-HVVHITMSYIHFLFPPFMNPFIYSIKTKQIQSGILRLFSLPHSRA |
| 3RFM Chain:A ((14-297)) | -----------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITIS-TGFCAACHG-CLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPM---LGWNNCGQP--------GCGEGQVACLFEDVVPMN-YMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHI-INCFTFFCPDCSHAPLWLMYLAIVLAH--TNSVVNPFIYAYRIREFRQTFRKIIRS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -231782 for 1871 contacts (-123.9/contact) +
2D Compatibility (PS) -25207 + (NN) -6001 + (LL) 3980
1D Compatibility (HY) -18400 + (ID) 3500
Total energy: -280910.0 ( -150.14 by residue)
QMean score : 0.215
|
|
|