Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPSATPGAQMGVPPGSREPSPVPPDYEDEFLRYLWRDYLYPKQYEWVLIAAYVAVFVVALVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLVDITESWLFGHALCKVIPYLQAVSVSVAVLTLSFIALDRWYAICHPLLFKS--TARRARGSILGIWAVSLAI-MVPQAAVMECSSVLPELANRTRLFSVCDERWA----DDLYPKIYHSCF-FIVTYLAPLGLMAMAYFQIFRKLWGRQIPGTTSALVRNWKRPSDQLGDLEQGLSGEPQPRARAFLAEVKQMRARRKTAKMLMVVLLVFALCYLPISVLNVLKRVFGMFRQASDREAVYACFTF-----SH---WLVY-------ANSAANPIIYNFLSGKFREQFKAAFSCCLPGLGPCGSLKAPSPRSSASHKSLSLQSRCSISKISEHVVLTSVTTVLP |
| 3PWH Chain:A ((8-300)) | -----------------------------------------------VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFA--ITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP------------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIF-------------------AAARRQLKQMES----QPLPGERARSTLQKEVHAAKSAA----IIAGLFALCWLPLHIIN--------------------CFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210632 for 1928 contacts (-109.2/contact) +
2D Compatibility (PS) -27018 + (NN) -10829 + (LL) 8880
1D Compatibility (HY) -29600 + (ID) 5000
Total energy: -274199.0 ( -142.22 by residue)
QMean score : 0.320
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