Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAIRRQRELSILPKVTLEAMNTTVMQGFNRSERCPRDTRIVQLVFPALYTVVFLTGILLNTLALWVFV-HIPSSSTFIIYLKNTLVADLIMTLMLPFKILSDSHLAPWQLRAFVCRFSSVIFYETMYVGIVLLGLIAFDRFLKIIRPLRNIFLKKPVFAKTVSIFIWFFLFFISLPNTILSNKEATPSSVKKCASLKGPLGLKWHQMVNNICQFIF-WTVFILML-VFYVVIAKKVYDSYRKSKSKDRKNN-KKLEGKVFVVVAVFFVCFAPFH-FARVPYTHSQTNNKTDCRLQNQLFIAKETTLFLAATNICMDPLIYIFLCKKFTEKLPCMQGRKTTASSQENHSSQTDNITLG |
| 4EA3 Chain:A ((130-400)) | ------------------------------------------------GLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQG-TDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTP--QDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSET------AVAILRFCTA-LGYVNSCLNPILYAFLDENFKACFR------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198743 for 1929 contacts (-103.0/contact) +
2D Compatibility (PS) -26192 + (NN) -9737 + (LL) 6704
1D Compatibility (HY) -23200 + (ID) 3550
Total energy: -254718.0 ( -132.05 by residue)
QMean score : 0.218
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