Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNATGTPVAPESCQQLAAGGHSRLIVLHYNHSGRLAGRGGPEDGGLGALRGLSVAASCLVVLENLLVLAAITSHMRSRRWVYYCLVNITLSDLLTGAAYLANVLLSGARTFRLAPAQWFLR--EGLLFTAL------AASTFSLLFTAGERFATMVRPVAESGATKTSRVYGFIGLCWLLAALLGMLPLLGWN-----------CLCAFDRCSSLLPLYSKRYILFCLVIFAGVLATI---MGLYGAIF-----RLVQASGQKAPRPAAR---RKARRLLKTVLMILLAFLVCWGPL-----FGLLLADVFGSNLWAQEYLRGMDWILALAVLNSAVNPIIYSFRSREVCRAVLSFLCCGCLRLGMRGPGDCLARAVEAHSGASTTDSSLRPRDSFRGSRSLSFRMREPLSSISSVRSI |
| 3RFM Chain:A ((12-294)) | ---------------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVL---------AIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFE---DVVPMNYMVYFNF----FACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWL------MYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180813 for 1717 contacts (-105.3/contact) +
2D Compatibility (PS) -24773 + (NN) -12235 + (LL) 6352
1D Compatibility (HY) -24000 + (ID) 4200
Total energy: -239669.0 ( -139.59 by residue)
QMean score : 0.189
|
|
|