Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATVNTDATDKDISKFKVTFTLVVSGIECITGILGSGFITAIYGAEWARGKTLPTGDRIMLMLSFSRLLLQIWM-MLENIFSLLFRIVYNQNSVYILFKVITVFLNHSNLWFAAWLKVFYCLRIANFNHPLFFLMKRKIIVLMPWLLRLSVLVSLSFSFPLSRDVFNVYVNSSIPIPSSNSTEKKYFSETNM-V-NL-VFFYNMGIFVPLIMFILAATLLILSLKRHTLHMGSNA-------TGSRDPSMKAHIGAIKATSYFLILYIFNAIALFLS-TSNIF----DTYSSWNILCKIIMAAYPAGHSVQLILGNPGLRRAWKRFQHQVPLYLKGQTL |
2Z73 Chain:A ((32-336)) | ---------------AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTK---SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG---RPMAAS-KKMSHRRAFIMIIFVWLWSVLWAIGPIFGWG-A-----YTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206241 for 2325 contacts (-88.7/contact) +
2D Compatibility (PS) -29897 + (NN) -12256 + (LL) 1160
1D Compatibility (HY) -15600 + (ID) 1650
Total energy: -264484.0 ( -113.76 by residue)
QMean score : 0.264
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