Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDP-GCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTVQYPGSWC-----FLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCH---VYHGQEAAQQRPRDSEVEM----MAQLLGIMVVAS-VCWLP-----LLVFIAQTVLRNPPAMSPAGQLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ |
2X72 Chain:A ((52-312)) | -----------------------------------MLGFPINFLTLYVTVQHKK----LRTPLNYILLNLAVADLF--MVFGGFTTTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVV---LAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLVGWSRYIPE--GMQCSCGIDYYTPHEETNNESFVIYMFV-------VHFIIPLI-VIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTS--------------AVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189635 for 1723 contacts (-110.1/contact) +
2D Compatibility (PS) -24412 + (NN) -3535 + (LL) 4648
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -217384.0 ( -126.17 by residue)
QMean score : 0.115
|
|
|