Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHTLYPTPFALYPINISAAWHLGPLPVSCFVSNKYQCSLAFGATTGLRVLVVVVPQTQLSFLSSLCLVSLFLHSLVSAHGEKPTKPVGLDPTLFQVVVGILGNFSLLYYYMFLYFRGYKPRSTDLILRHLTVADSLVILSKRIPETMAT-F-GLKHFDNYFGCKFLLYAHRVGRGVSIGSTCLLSV--FQVITINPRNSRWAEMKVKAPTYIGLSNILCWAFHMLVNAIFPIYTTGKWSNNNITKKGDLGYCSAPLSDEVTKSVYAALTSFHDVLCLGLMLWASSSIVLVLYRHKQQVQHICR-------------------------------------------------------------------------------------------------------------------------------------N-----------------NLYPNSSPGNRAIQSILALVSTFALCYALSFITYVYLALFDN--SSWWLVNTAALIIACFPTISPFVLMCRDPSRSRLCSICCRRNRRFFHDFRKM |
| 3PBL Chain:A ((44-472)) | -------------------------------------------------------------------------------------------SYCALILAIVFGNGLVCMAVLKE---RALQTTTNYLVVSLAVADLLVATLV-MPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVV-MPVHYQHGT-GQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT---------GDPTVCSISNPD-----FVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169286 for 2020 contacts (-83.8/contact) +
2D Compatibility (PS) -27779 + (NN) -2707 + (LL) 8448
1D Compatibility (HY) -14400 + (ID) 2050
Total energy: -207774.0 ( -102.86 by residue)
QMean score : 0.255
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