Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH |
2KJF Chain:A ((1-60)) | ---------------------------------------------------------------------------------------LVAYGIAQGTAEKVVSLIN---------AGLTVGSIISILGGVTVGLSGVFTAVKAAIAKQGIKKAIQL------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17899 for 384 contacts (-46.6/contact) +
2D Compatibility (PS) -6149 + (NN) -2180 + (LL) 11600
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -16878.0 ( -43.95 by residue)
QMean score : 0.454
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