Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRA-FTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
2WQM Chain:A ((38-291)) | -----------------------------------KKIGRG--SEVY---RAACLLDGVPVALKKVQIF--DLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGD--LSRMIKH-FKKQKRLIPERTVWKYFVQLCSALEHMH-SRRVMHRDIKPANVFITAT-GVVKLGDL---------------------TPYYMSPERIHENGY-NFKSDIWSLGCLLYEMAALQSPFY---MNLYSLCKKIEQCDY------------PPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDVAKRMH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70135 for 1695 contacts (-41.4/contact) +
2D Compatibility (PS) -24700 + (NN) -16551 + (LL) 4512
1D Compatibility (HY) -22000 + (ID) 3350
Total energy: -132224.0 ( -78.01 by residue)
QMean score : 0.460
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