Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDEQSQGMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE--DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS
2XKD Chain:A ((7-262))--------------------------------DYEVLYTIGTG---RCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD-----LKPANVFLDGKQNVKLGDF--------------TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 2XKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133276 for 1628 contacts (-81.9/contact) +
2D Compatibility (PS) -24765 + (NN) -16708 + (LL) 2412
1D Compatibility (HY) -22400 + (ID) 4300
Total energy: -199037.0 ( -122.26 by residue)
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_2XKD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XKD-query.scw
PDB file : Tito_Scwrl_2XKD.pdb: