Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSGCAWGAEPPRFLEAFGRLWQVQSRLGSGSSASVYRVRCCGNPGSPPGALKQFLPPGTTGAAASAAEYGFRKERAALEQLQGHRNIVTLYGVFTIHFSPNVPSRCLLLELLDVSVSELLLYSSHQGCSMWMIQHCARDVLEALAFLHHEGYVHADLKPRNILWSAENECFKLIDFGLSFKEGNQDVKY---IQTDGYRAPEAELQNCLAQAGLQSDTECTSAVDLWSLGIILLEM------FSG-MKLKHTVRSQEWKANSSAIIDHIFASKAVVNAAIPAYHLRD--------------LIKSMLHDDPSRRIPAEMALCSPFFSIPFAPHIEDLVMLPTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRGYLYQTLL |
3QQJ Chain:A ((9-306)) | ---------------MENFQKV----EKIGEGTYGVVYKARNKLT-GEVVALKKIR----TEGVPSTAI-----REISLLKELN-HPNIVKLLDV--IHTENKL---YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI-LLGC---------KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF--------QD-VTKPVPHLRL---------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -137172 for 2107 contacts (-65.1/contact) +
2D Compatibility (PS) -29121 + (NN) -11525 + (LL) 8308
1D Compatibility (HY) -21200 + (ID) 4750
Total energy: -195460.0 ( -92.77 by residue)
QMean score : 0.257
|
|
|