Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCSTVYNTLMPCLGYVQSGGV-VPRACCGGIKKLVSTARSTPDRRSICTCLKNVGSGAAGGPYVSRAAGLPGKCKVPLPFNCNSN
1AFH Chain:A ((1-86))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG-VSGLNAGNAASIPSKCGVSIPYTISTS
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68853 for 680 contacts (-101.3/contact) +
2D Compatibility (PS) -8382 + (NN) 747 + (LL) 144
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -81944.0 ( -120.51 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: